Packages from omnilab · Transparency log
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omnilab/brightsky
Omnilab Bright Sky: the Deutscher Wetterdienst's open data through Bright Sky - hourly weather at a point or a DWD or WMO station, the observations back to 2010 joined to the MOSMIX forecasts (temperature, dew point, humidity, precipitation and its probability, pressure, wind and gusts, cloud cover,
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omnilab/cactus
Omnilab Cactus: the NCI/CADD Chemical Identifier Resolver - a structure from a name, a CAS number, an InChIKey, an InChI or a SMILES, and its standard InChIKey, InChI, SMILES, IUPAC name, formula, molecular weight, CAS numbers, names and picture; OPSIN for a name it cannot read; no key.
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omnilab/cams
Omnilab CAMS: the Copernicus Atmosphere Monitoring Service's Atmosphere Data Store - its datasets (European air quality forecasts and reanalyses, global atmospheric composition, greenhouse gases, fire emissions, solar radiation) as products over a place and a period, its catalogue's search, a datase
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omnilab/cds
Omnilab CDS: the Copernicus Climate Data Store - its datasets (ERA5, ERA5-Land, seasonal forecasts, climate projections, satellite and in-situ observations) as products over a place and a period, its catalogue's search, a dataset's variables and request form, what a request would cost, read without
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omnilab/chebi
Omnilab ChEBI: a chemical entity of biological interest by ChEBI id, InChIKey, CAS number, KEGG id or name - its definition, formula, masses, charge, SMILES, InChI, structure depiction, its ontology (what it is a kind of, its roles, functional parents, conjugates) and its identifiers in CAS, KEGG an
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omnilab/chembl
Omnilab ChEMBL: a bioactive molecule by ChEMBL id, InChIKey or name - its type, maximum development phase, computed properties (molecular weight, ALogP, polar surface area, hydrogen bond donors and acceptors, Lipinski's rule of five, QED), SMILES, InChI, structure depiction, mechanisms of action and
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omnilab/clinvar
Omnilab ClinVar: a variation by its VariationID or VCV accession - its name, type, germline classification, review status, conditions, genes, protein change, consequence, location, SPDI, allele frequencies, aliases - its dbSNP id as a cross-reference, its genes and conditions (Mondo, OMIM, Orphanet,
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omnilab/cod
Omnilab COD: a crystal structure of the Crystallography Open Database by its COD id (9008565) - its names, formula, unit cell with uncertainties, space group, Z, temperature, radiation, R factors, publication and DOI - the entry it duplicates as a related thing, its CIF as a file; a search of the en
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omnilab/codata
Omnilab CODATA: the fundamental physical constants of CODATA as NIST publishes them (2022 adjustment) - each constant by NIST's short name (mp, c) or its name, its value, standard uncertainty and unit, whether exact, its value as published; a search; two calls in all, no key.
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omnilab/col
Omnilab Catalogue of Life: a taxon or synonym of the Catalogue of Life by its COL id, by the GBIF key that names it (GBIF's taxonomy is the COL eXtended Release) or by its name - authority, rank, status, classification, vernacular names, distribution, scrutinizer, source record; its GBIF key and the
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omnilab/copernicus
Omnilab Copernicus: the products of the Copernicus Data Space Ecosystem's STAC catalogue - Sentinel-1, -2, -3, -5P, Landsat, MODIS, the Copernicus DEM and services - searched by collection, point or box, period and cloud cover, page by page, with their footprints, properties, assets and thumbnails;
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omnilab/donki
Omnilab DONKI: NASA's space weather events from the CCMC's Database Of Notifications, Knowledge, Information - solar flares (GOES class, begin, peak, end, source, active region), coronal mass ejections (speed, half angle, direction, type), geomagnetic storms (Kp), interplanetary shocks, solar energe
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omnilab/earthdata
Omnilab Earthdata: NASA's Common Metadata Repository (CMR) - the granules of NASA's Earth observation collections (HLS, MODIS, VIIRS, GPM, SMAP, ICESat-2, OPERA...) as products by collection, point or box, period and cloud cover, page by page, with their footprints, attributes, browse images and fil
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omnilab/ebird
Omnilab eBird: a bird taxon of the eBird/Clements taxonomy by its species code (no key) - scientific and common names in a locale, category, order, family, banding codes - and, with the user's eBird API key, a taxon by name, a search of names, a checklist, and the recent observations around a point
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omnilab/elevation
Omnilab Elevation: the elevation of points and of a profile between two points from a digital elevation model (SRTM, ASTER, EU-DEM, Mapzen, ETOPO1, GEBCO...), through Open Topo Data's public API or a self-hosted instance, as Points with their elevation in metres, outside the contract's shapes; no ke
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omnilab/emsc
Omnilab EMSC: an earthquake of the European-Mediterranean Seismological Centre's catalogue by its SeismicPortal id - magnitude and type, place, depth, time, Flinn-Engdahl region, contributing agency - and the earthquakes of a box or around a point over a period as series (count per step, each one's
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omnilab/ensembl
Omnilab Ensembl: a gene, transcript, protein or exon of Ensembl by its id, or a gene by its symbol in a species - its symbol, name, biotype, species, assembly and place on the genome, a gene's NCBI Gene record and Swiss-Prot proteins and a protein's UniProt entries as cross-references, its species,
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omnilab/exoplanets
Omnilab NASA Exoplanet Archive: a confirmed exoplanet by its name (51 Peg b, Kepler-22b, Proxima Centauri b, Dimidium) - its mass, radius, density, orbit, equilibrium temperature and insolation with units and uncertainties, how, when and where it was discovered, its host star's parameters and the sy
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omnilab/gaia
Omnilab Gaia: a source of ESA's Gaia DR3 by its source_id or designation (Gaia DR3 4472832130942575872) - its position at epoch J2016.0, parallax, proper motion and RUWE, its G, BP, RP and RVS magnitudes, radial velocity and line broadening, its astrophysical parameters (GSP-Phot temperature, gravit
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omnilab/gbif
Omnilab GBIF: a taxon of GBIF's taxonomy (the Catalogue of Life eXtended Release since June 2026) by its key, its legacy GBIF Backbone number, its NCBI Taxonomy id or a scientific name GBIF matches - its name, authority, rank, status, IUCN Red List category, common name, publication and classificati
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omnilab/gwas
Omnilab GWAS Catalog: a study by its accession (GCST000854), a variant by its rs id, a trait by its EFO, Mondo or HPO id - reported and mapped traits, samples, ancestries, platforms, functional class, location, mapped genes, studies - each with its strongest associations and the studies, variants an
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omnilab/hgnc
Omnilab HGNC: a human gene by its HGNC id (HGNC:4827), approved, previous or alias symbol, or an id HGNC records (NCBI Gene, Ensembl, UniProt, OMIM) - its approved name, locus group and type, location, previous symbols and names, aliases, gene groups, status, dates, MANE Select, RefSeq and CCDS ids
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omnilab/horizons
Omnilab Horizons: the ephemeris of a body of the solar system - a planet, a moon, the Sun, an asteroid, a comet, a spacecraft - seen from a place on the Earth over a period, as series: right ascension and declination, azimuth and elevation, airmass, apparent magnitude, illuminated fraction, angular
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omnilab/inaturalist
Omnilab iNaturalist: a taxon of iNaturalist by its id or a name it matches - its rank, common name in a language, iconic group, IUCN status, lineage, Wikipedia summary, observation count, default photo with its licence and attribution, its parent as a related thing - a search of its names, and the o
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omnilab/interpro
Omnilab InterPro: an InterPro entry (IPR000971) or a Pfam family (PF00042) - its name, type, description, member signatures, GO terms, protein and structure counts, Pfam clan, representative structure, overlapping entries and hierarchy - a UniProt protein with the InterPro entries and Pfam families
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omnilab/itis
Omnilab ITIS: a taxon of the Integrated Taxonomic Information System by its TSN or its name - authority, rank, usage and why, accepted name, hierarchy, common names, geographic divisions, jurisdictional origins, credibility rating; parent, accepted name, synonyms and children related - and a search
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omnilab/iucn
Omnilab IUCN Red List: a taxon of the IUCN Red List of Threatened Species by its SIS id or scientific name - classification, authority, common names, synonyms, assessing group - with its latest global assessment (Red List category, criteria, population trend, year, possibly extinct, citation), throu
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omnilab/jpl
Omnilab JPL: an asteroid or a comet by its number, designation or name, from NASA/JPL's Small-Body Database API - its orbit (elements at their epoch with their uncertainties, period, MOID), physical parameters (absolute magnitude, diameter, albedo, rotation period, density, spectral types), NEO and
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omnilab/kegg
Omnilab KEGG: a compound (C07481), a drug (D00528), a reaction (R00200), a pathway map (map00010, hsa00010) or an enzyme (2.7.1.40) by its KEGG identifier - names, formula and masses, a reaction's equation, a pathway's class and description, an enzyme's class and systematic name - the same thing in
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omnilab/launches
Omnilab Launches: orbital launches of The Space Devs' Launch Library 2, past and planned - a launch by id (rocket, provider, mission and orbit, pad and its place, date and its precision, window, status, probability, failure), a search by text, and the launches of a period as occurrences, each with i
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omnilab/materials-project
Omnilab Materials Project: computed properties of inorganic materials by Materials Project id (mp-149) - formula, symmetry, density, energies per atom, stability, band gap, magnetism, elastic moduli - and the materials of a formula or a chemical system, through api.materialsproject.org (an account's
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omnilab/mpc
Omnilab MPC: a minor planet, comet or natural satellite of the IAU's Minor Planet Center by its number, designation (provisional, packed or not) or name - its designations, name and naming citation, its orbit as the MPC computes it (osculating elements with their uncertainties, perihelion, period, M
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omnilab/ncbi
Omnilab NCBI: a gene of NCBI Gene by its GeneID - symbol, name, organism, place on the genome, summary, its UniProt and Ensembl ids - and a taxon of NCBI Taxonomy by its id or a name - scientific name, rank, lineage, common name, GBIF key - and a search of either, through NCBI Datasets v2 and E-util
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omnilab/ned
Omnilab NED: an object of the NASA/IPAC Extragalactic Database - a galaxy, a quasar, a cluster, a radio source - by any of its names: its preferred name, type, J2000 position with its uncertainty, redshift with its uncertainty and quality, galactic coordinates, and how many references, photometric p
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omnilab/noaa
Omnilab NOAA: weather and climate observations as series at a point - the station records of the world from NCEI's Access Data Service (GHCN-Daily by day, the Global Summary of the Month and of the Year: TMAX, TMIN, TAVG, PRCP, SNOW, AWND... in metric units) at the nearest station that has them or a
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omnilab/obis
Omnilab OBIS: a marine taxon of the Ocean Biodiversity Information System by its WoRMS AphiaID or its name - rank, status, classification, vernacular names, NCBI id, habitat, how many records OBIS holds - and the occurrences of a place and a period (by taxon, depth, dataset, Red List species), each
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omnilab/open-meteo
Omnilab Open-Meteo: weather series at a point - hourly, every 15 minutes or daily, any variable Open-Meteo names, with the units it answers in - from the forecast API (92 days back, 16 ahead) and the historical archive (ERA5, from 1940), joined when a period spans both; and the air quality at a poin
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omnilab/openaq
Omnilab OpenAQ: air quality measurements of the OpenAQ platform (API v3) - the hourly or daily averages of a pollutant (PM2.5, PM10, NO2, O3, SO2, CO, black carbon... by OpenAQ's parameter names) at the nearest location of a point measuring it, in the sensor's unit. An OpenAQ API key is required (th
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omnilab/opentargets
Omnilab Open Targets: a target by its Ensembl gene, a disease or phenotype by its EFO, Mondo, HPO or Orphanet id, a drug by its ChEMBL id - names, descriptions, locations, classes, therapeutic areas, parents, mechanisms of action, indications - their associations with scores, drugs and clinical cand
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omnilab/oqmd
Omnilab OQMD: the Open Quantum Materials Database - an entry by its OQMD id (formula, space group, prototype, volume, formation energy, hull distance, band gap, ICSD id) and the entries of a composition or a phase space, through its RESTful API, no key. Not tested live.
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omnilab/pbdb
Omnilab PBDB: a taxon of the Paleobiology Database, fossil or living, by its number or name - rank, accepted name, common name, extant or not, first and last appearances (intervals and ages in Ma), occurrences counted, classification, ecology, reference - a fossil occurrence by its number, a search
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omnilab/pdb
Omnilab PDB: an entry of the Protein Data Bank by its PDB id through RCSB PDB's GraphQL Data API - its title, keywords, method, resolution, weight, dates, primary citation and authors, its polymer entities and ligands, an image of its assembly; the UniProt proteins of its chains, their organisms and
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omnilab/pubchem
Omnilab PubChem: a compound by CID, name, InChIKey, InChI, CAS number or SMILES - its computed properties with units (formula, weight, XLogP, TPSA...), synonyms, description, 2D structure image and its identifiers in ChEBI, ChEMBL, Wikidata, CAS, UNII, DSSTox and KEGG - through PubChem's PUG-REST, n
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omnilab/quickgo
Omnilab QuickGO: a Gene Ontology term (GO:0005829) - its name, definition, aspect, synonyms, comment, obsolescence, direct parents by relation and children - a UniProt protein with the GO terms it is annotated to by aspect and evidence, its annotations with their evidence, reference and curator, and
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omnilab/reactome
Omnilab Reactome: a pathway or a reaction by its stable identifier (R-HSA-70171) - its names, species, summary, compartments, GO biological process, Rhea reaction, inputs, outputs and catalysts, review status, release dates, DOI and diagram - its participants (UniProt proteins, ChEBI small molecules
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omnilab/rhea
Omnilab Rhea: a biochemical reaction by any of its four Rhea ids (18157, 18160) or its KEGG reaction (R00200) - its equation, status, balance, transport, sides and their participants, citations - its quartet and KEGG reaction as identifiers, its ChEBI participants, EC numbers, GO term, Reactome even
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omnilab/simbad
Omnilab SIMBAD: an astronomical object beyond the solar system by any of its identifiers (M31, Betelgeuse, HD 39801...) - its main identifier, object type, ICRS coordinates, proper motion, parallax, radial velocity and redshift, spectral and morphological types, magnitudes and other designations - a
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omnilab/string
Omnilab STRING: a protein by its STRING id (9606.ENSP00000269305), UniProt accession, Ensembl protein or name - its preferred name, protein name, annotation, species and Ensembl protein - its interaction partners as related things with their combined scores, the network among proteins with each evid
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omnilab/swpc
Omnilab SWPC: NOAA's Space Weather Prediction Center - the probability of an aurora overhead at a point (OVATION's nowcast) as a series, and outside the contract, space weather not being at a place on the Earth, the planetary Kp index observed and predicted, the solar wind at L1 (speed, density, tem
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omnilab/tides
Omnilab Tides: NOAA CO-OPS (Tides and Currents) - a station's water level every six minutes, verified hourly heights and highs and lows, tide predictions (every six minutes, hourly, or the highs and lows), water and air temperature as series, at a station named or the nearest one of a point, cut to
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omnilab/uniprot
Omnilab UniProt: a protein of UniProtKB by accession or entry name - its names, gene, organism, function, length, mass and sequence, cofactors, ligands, location and keywords, its NCBI Gene and Ensembl genes as cross-references, its organism, PDB structures and ligands as related things - and UniPro
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omnilab/usgs
Omnilab USGS: an earthquake of the USGS catalogue (ComCat) by its event id - magnitude and type, place, depth, time, felt reports and intensities (DYFI, ShakeMap), tsunami flag, PAGER alert level, its ids in the other networks - and the earthquakes of a box or around a point over a period as series
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omnilab/usgs-water
Omnilab USGS Water: the USGS's water data through the Water Data OGC APIs (which replace the WaterServices) - a monitoring location's series (discharge, gage height, water temperature, any parameter by its USGS code) as recorded every 5 or 15 minutes, hourly, or as the USGS's daily statistics, at a
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omnilab/vizier
Omnilab VizieR: the CDS's library of published astronomical catalogues (Strasbourg) - its tables whose description holds a text, as datasets (id, catalogue, title, authors, rows), and the rows of a table around a point of the sky or an object, each column with its unit and description - through TAPV
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omnilab/wikidata
Omnilab Wikidata: an item by Q-number, by the identifier of a science base its statements carry (PubChem CID, ChEBI, CAS, InChIKey, ChEMBL, UniProt, NCBI Gene and Taxonomy, Ensembl, GBIF, iNaturalist, SIMBAD, JPL SBDB, USGS earthquake, UNII, DSSTox, KEGG) or by label - its label, description and ali
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omnilab/worms
Omnilab WoRMS: a taxon of the World Register of Marine Species by its AphiaID, its name, or the ITIS TSN, NCBI taxon or IUCN id WoRMS knows it by - accepted name and status, classification, synonyms, vernacular names, habitat flags, the citation WoRMS asks for, its ITIS, NCBI and IUCN ids as cross-r